Genepop on the Web (Popularity: )

Online version of the program for populational genetics.

PEDANT (Popularity: )

Completely automatic and exhaustive analysis of protein sequence sets - from individual sequences to complete ...

TreeTop (Popularity: )

Multiple sequence alignment based phylogenetic tree prediction program.

3D-JIGSAW (Popularity: )

Automated comparative (homology) protein modelling, including an interactive mode which highlights known domains and allows ...

BLAST (Popularity: )

NCBI's sequence similarity search tool designed to support analysis of nucleotide and protein databases.

GRIMM/MGR (Popularity: )

A tool for constructing phylogenies based on gene order for unichromosomal and multichromosomal genomes

GeneStream II (Popularity: )

Sequence comparision and search programs, including the rigorous Smith-Waterman algorithm (in FastA and Ssearch) - ...

Jpred (Popularity: )

Secondary protein structure prediction from amino acid sequence; based on a consensus from several methods ...

SA National Bioinformatics Institute (Popularity: )

SANBI aims to bring genome information, computational biology, and analytical tools to the South African ...

Database of Interacting Proteins (DIP) (Popularity: )

The DIP catalogs experimentally determined interactions between proteins while combining information from a variety of ...

PIR-International Protein Sequence Database (Popularity: )

produces a comprehensive, non-redundant, and expertly annotated protein sequence database. PIR features integrated annotation search ...

Meta-MEME v2.0.1 (Popularity: )

Software toolkit for building and using motif-based hidden Markov models of DNA and proteins - ...

PredictProtein Server (Popularity: )

Most widely used server for analysing protein sequences, searching protein databases, and predicting protein structure ...

Protonet (Popularity: )

Provides automatic hierarchical classification of proteins sequences.

The Protein Information Resource (Popularity: )

In collaboration with the Munich Information Center for Protein Sequences (MIPS) and the Japanese International ...

General Repository for Interaction Datasets (GRID) (Popularity: )

The GRID is a database of genetic and physical interactions. It contains interaction data from ...

Vista tools (Popularity: )

Multiple sequence alignment server and whole genome alignment database.

YMF - DNA Motif Finding Program (Popularity: )

Finds novel transcription factor binding sites by searching for over-represented (most significant motifs) motifs in ...

ReadSeq (Popularity: )

Convert various aminoacid and nucleotide sequence data formats including FASTA, GenBank, Phylip and others.

WU-BLAST Archives (Popularity: )

Sensitive, selective, and rapid sequence database searching with gapped alignments - from Washington Univ.-St.Louis.