Sites

YMF - DNA Motif Finding Program (Popularity: )

Finds novel transcription factor binding sites by searching for over-represented (most significant motifs) motifs in ...

GenScan Server (Popularity: )

Identification of gene features such as exons and splice sites in genomic DNA.

Protonet (Popularity: )

Provides automatic hierarchical classification of proteins sequences.

GeneMatcher (Popularity: )

Access to Smith-Waterman-based FDF sequence comparison program, with excellent explanation of when to use it ...

Verbumculus Genetic Sequence Analyzer (Popularity: )

An interesting tool to discover and visualize over- or under-represented words in genetic sequences. Requires ...

CUBIC: Columbia University Bioinformatics Center (Popularity: )

Features PredictProtein service for sequence analysis and protein structure prediction, META for single-page interface to ...

Proteomics Analysis: Z3 and LabOnWeb's Z3OnWeb (Popularity: )

Proteomic analysis for analyzing 2D-Gel images. Use Compugen's Z3 or Z3OnWeb utitlities for automatic spot ...

Sequence Alignment and Modeling System (Popularity: )

Implementation of hidden Markov models for sequence analysis. Free UNIX software for nonprofit groups, and ...

Combinatorial Extension of Polypeptides (Popularity: )

Method for finding 3-D similarities in protein structures from the UCSD Supercomputer Center.

Scansite (Popularity: )

Scansite searches for motifs within proteins that are likely to be phosphorylated by specific protein ...

Interactive Blast Query (Popularity: )

Utility for online manipulation of Blast results. Results organized in a table format.

Munich Information Center for Protein Sequences (MIPS) (Popularity: )

Bioinformatics research group offering organism specific information (Yeast, Cress) as well as search tools for ...

Microarray Database Gateway (Popularity: )

Tools for managing, accessing, and analyzing cDNA microarray data generated by the NCI Div. of ...

Swiss-Pdb Viewer (Popularity: )

User-friendly interface allowing analysis of several proteins at once, including superimposition to deduce structural alignments, ...

The ISREC Group Servers (Popularity: )

Detection and assessment of similarity between distantly related sequences by means of a variety of ...

IBM Bioinformatics Group - Tools & Content (Popularity: )

Several genomics and proteomics tools, including multiple alignments, gene expression analysis, tandem repeat and motif ...

WU-BLAST Archives (Popularity: )

Sensitive, selective, and rapid sequence database searching with gapped alignments - from Washington Univ.-St.Louis.

ProteinLounge (Popularity: )

Bioinformatics portal which integrates protein information and many databases and research tools useful for researchers ...

Human Genome Sequencing Center (Popularity: )

Provides direct access to the data computed on several organisms such as Rat, Mouse, Drosophila, ...

InterPro - The Integrated Resource of Protein Domains and Functional Sites. (Popularity: )

A database built from Pfam, PRINTS and PROSITE.