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Friday, 16 May, 2008

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Software

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GeneRunner for Windows (Popularity: )

A fairly old sequence analysis tool for everyday lab use. Formerly a commercial product - ...

AcaClone pDRAW32 (Popularity: )

Freeware DNA cloning, analysis and visualization software.

Artemis: A DNA Sequence Viewer and Annotation Tool (Popularity: )

Java program to display a DNA sequence, annotated with features, ORFs. Reads many input formats.

HMMER - profile hidden Markov models for sequence analysis (Popularity: )

Sean Eddy's tools to build HMMs from multiple alignments, align sequences to HMMs, calculate e-scores, ...

PubCrawler - An Update Alerting Service for PubMed and GenBank (Popularity: )

Software and an online service for periodically performing predefined searches at NCBI, reporting new results ...

Phred/Phrap/Consed System Home Page (Popularity: )

basecaller / assembler / sequencer finisher and related tools from the UW Genome Center.

Molecular Evolutionary Genetics Analysis (MEGA2) software (Popularity: )

Provides free downloadable MEGA2 software for use in comparative sequence analysis of genetic data. Program ...

Linux Software Encyclopedia - Bioinformatics (Popularity: )

Links to Bioinformatics software for Linux. From the Linux Software Encyclopedia.

The Sanger Centre: Software (Popularity: )

Production software used at the Sanger Centre, physical mapping software, informatics and analysis software, and ...

Meta-MEME v2.0.1 (Popularity: )

Software toolkit for building and using motif-based hidden Markov models of DNA and proteins - ...

AnnHyb - Nucleotidic Sequence Manager (Popularity: )

Free software for working with and managing nucleotide sequences in multiple formats. Many features including ...

Premier Biosoft International (Popularity: )

Developers of software for real time PCR primer design, TaqMan, molecular beacons, DNA microarray analysis, ...

Computer Program for Polyphasic Taxonomy Analysis (Popularity: )

The proBiosys suite of programs compares phenetic, chemotaxonomic and nucleic acid sequence data. Algorithms for ...

XDigitize (Popularity: )

A visualization software system for evaluation of hybridisation experiments.

The ARB Project (Popularity: )

A free sequence database application for Unix. It includes a sequence editor, several sequence aligners, ...

High Throughput Screening Tools (Popularity: )

Analytical tools and SQL scripts that solve common problems in drug discovery.

Bio Informatic Bacterial Identification (Popularity: )

Bibliographic site for management and alignment of bacteria and fungi sequences.

Phylogenetic Analysis Library (Popularity: )

PAL library is a Java toolkit for determining evolutionary trends.

BioQuery (Popularity: )

Tools that searches multiple biomedical databases from your desktop.

Bioperl.org (Popularity: )

The Bioperl Project is an international association of developers of open source Perl tools for ...

 
 

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