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SWISS-MODEL |
Popularity:  Hit: 312 | Visit: 9 |
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Bionet.software.x-plor (Popularity: ): Archive of newsgroup for X-PLOR software for 3D macromolecular structure determination.
NAMD (Popularity: ): A parallel, object-oriented molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD is distributed free of charge and includes source code.
AMMP (Popularity: ): A free program suite for molecular mechanics, dynamics and modeling with some special features like docking or ab initio DFT calculations. Runs under Linux/Unix and Win9x. The site provides access ...
EGO VIII (Popularity: ): A program to perform molecular dynamics simulations on parallel as well as on sequential computers.
B: On-line Molecular Modeling (Popularity: ): "B" (formerly known as Biomer) is a Java-based molecular modeling program for small organic molecules and biopolymers. Supports nucleic acids (DNA/RNA), polypeptides, polysaccharides, the AMBER force field, geometry optimization, simulated ...
AutoDock (Popularity: ): A suite of automated docking tools. It is designed to predict how small flexible molecules, such as substrates or drug candidates, bind to a receptor of known 3D structure.
Ghemical (Popularity: ): An easy-to-use molecular editor and modeling package with all-atoms molecular mechanics, reduced protein models and links to many common chemistry programs. Ghemical is released under the GNU GPL and includes ...
Folding@home (Popularity: ): It is a distributed computing project which studies protein folding, misfolding, aggregation, and related diseases.
YASARA (Popularity: ): (Yet Another Scientific Artificial Reality Application) is an interactive real-time molecular dynamics program.
EGO (Popularity: ): A parallel program for molecular dynamics simulations of biomolecules.
Pande Group (Popularity: ): Folding simulations for fusion peptides, proteins and RNA with aim of predicting structure from genome by research at Stanford University, California.
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